Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXD8P13378 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD8P13378 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD8P13378 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD8P13378 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD8P13378 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD8P13378 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD8P13378 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD8P13378 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD8P13378 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD8P13378 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD8P13378 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD8P13378 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD8P13378 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 MRPL20P1-201ENST00000400819 433 ntBASIC19.42■□□□□ 0.7
HOXD8P13378 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD8P13378 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.42■□□□□ 0.7
HOXD8P13378 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD8P13378 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 GGTLC5P-201ENST00000617623 998 ntBASIC19.42■□□□□ 0.7
HOXD8P13378 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD8P13378 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD8P13378 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD8P13378 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXD8P13378 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD8P13378 RHOQP3-201ENST00000437982 621 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD8P13378 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 AC096734.2-201ENST00000562054 433 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD8P13378 AC018845.2-201ENST00000568326 409 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.41■□□□□ 0.7
HOXD8P13378 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXD8P13378 AL513190.1-201ENST00000621254 727 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD8P13378 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD8P13378 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD8P13378 REXO1L11P-201ENST00000620964 1927 ntBASIC19.41■□□□□ 0.7
HOXD8P13378 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD8P13378 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD8P13378 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms