Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOP2AP11388 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC30.71■■■□□ 2.51
TOP2AP11388 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
TOP2AP11388 NEK7-201ENST00000367383 586 ntTSL 2 BASIC30.71■■■□□ 2.51
TOP2AP11388 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOP2AP11388 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC30.71■■■□□ 2.51
TOP2AP11388 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC30.71■■■□□ 2.51
TOP2AP11388 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC30.71■■■□□ 2.51
TOP2AP11388 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOP2AP11388 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TOP2AP11388 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TOP2AP11388 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOP2AP11388 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOP2AP11388 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOP2AP11388 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
TOP2AP11388 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
TOP2AP11388 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC30.7■■■□□ 2.51
TOP2AP11388 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TOP2AP11388 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC30.7■■■□□ 2.51
TOP2AP11388 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC30.7■■■□□ 2.51
TOP2AP11388 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TOP2AP11388 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC30.7■■■□□ 2.51
TOP2AP11388 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
TOP2AP11388 PI4KAP1-204ENST00000612579 1703 ntBASIC30.7■■■□□ 2.51
TOP2AP11388 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC30.7■■■□□ 2.51
TOP2AP11388 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
TOP2AP11388 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
TOP2AP11388 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
TOP2AP11388 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC30.69■■■□□ 2.5
TOP2AP11388 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 AL390955.2-201ENST00000603032 514 ntBASIC30.69■■■□□ 2.5
TOP2AP11388 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC30.69■■■□□ 2.5
TOP2AP11388 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TOP2AP11388 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC30.68■■■□□ 2.5
TOP2AP11388 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC30.68■■■□□ 2.5
TOP2AP11388 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC30.68■■■□□ 2.5
TOP2AP11388 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC30.68■■■□□ 2.5
TOP2AP11388 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 WIZP1-201ENST00000531444 2299 ntBASIC30.68■■■□□ 2.5
TOP2AP11388 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC30.68■■■□□ 2.5
TOP2AP11388 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC30.68■■■□□ 2.5
TOP2AP11388 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOP2AP11388 NABP1-203ENST00000409510 843 ntTSL 5 BASIC30.68■■■□□ 2.5
TOP2AP11388 SLBP-205ENST00000488267 987 ntTSL 2 BASIC30.68■■■□□ 2.5
TOP2AP11388 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TOP2AP11388 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOP2AP11388 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC30.67■■■□□ 2.5
TOP2AP11388 AL135999.2-201ENST00000622438 1686 ntBASIC30.67■■■□□ 2.5
TOP2AP11388 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOP2AP11388 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TOP2AP11388 FAM185BP-201ENST00000443595 716 ntBASIC30.67■■■□□ 2.5
TOP2AP11388 AC112191.1-201ENST00000523689 701 ntBASIC30.67■■■□□ 2.5
TOP2AP11388 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC30.67■■■□□ 2.5
TOP2AP11388 AC092364.2-202ENST00000597012 1073 ntBASIC30.67■■■□□ 2.5
TOP2AP11388 AMT-250ENST00000637682 1823 ntTSL 5 BASIC30.67■■■□□ 2.5
TOP2AP11388 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
TOP2AP11388 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC30.66■■■□□ 2.5
TOP2AP11388 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC30.66■■■□□ 2.5
TOP2AP11388 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC30.66■■■□□ 2.5
TOP2AP11388 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC30.66■■■□□ 2.5
TOP2AP11388 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC30.66■■■□□ 2.5
TOP2AP11388 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
TOP2AP11388 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
TOP2AP11388 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TOP2AP11388 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2AP11388 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
TOP2AP11388 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TOP2AP11388 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC30.65■■■□□ 2.5
TOP2AP11388 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC30.65■■■□□ 2.5
TOP2AP11388 AL513480.1-201ENST00000451731 511 ntBASIC30.65■■■□□ 2.5
TOP2AP11388 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC30.65■■■□□ 2.5
TOP2AP11388 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
TOP2AP11388 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
TOP2AP11388 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC30.65■■■□□ 2.5
TOP2AP11388 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TOP2AP11388 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
TOP2AP11388 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
TOP2AP11388 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms