Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 IGHGP-201ENST00000390555 1178 ntBASIC18.91■□□□□ 0.62
FAM228BP0C875 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FAM228BP0C875 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.91■□□□□ 0.62
FAM228BP0C875 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.91■□□□□ 0.62
FAM228BP0C875 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
FAM228BP0C875 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.91■□□□□ 0.62
FAM228BP0C875 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM228BP0C875 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FAM228BP0C875 AL121761.2-201ENST00000598007 1648 ntBASIC18.91■□□□□ 0.62
FAM228BP0C875 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM228BP0C875 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.91■□□□□ 0.62
FAM228BP0C875 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FAM228BP0C875 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM228BP0C875 AC073508.3-201ENST00000619697 1419 ntBASIC18.91■□□□□ 0.62
FAM228BP0C875 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
FAM228BP0C875 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 TERF1P1-201ENST00000311003 1181 ntBASIC18.9■□□□□ 0.62
FAM228BP0C875 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.9■□□□□ 0.62
FAM228BP0C875 AC005104.2-201ENST00000427818 678 ntBASIC18.9■□□□□ 0.62
FAM228BP0C875 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
FAM228BP0C875 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.9■□□□□ 0.62
FAM228BP0C875 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.9■□□□□ 0.62
FAM228BP0C875 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.9■□□□□ 0.62
FAM228BP0C875 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.9■□□□□ 0.62
FAM228BP0C875 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.9■□□□□ 0.62
FAM228BP0C875 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
FAM228BP0C875 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.9■□□□□ 0.62
FAM228BP0C875 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM228BP0C875 BX276092.7-203ENST00000637198 1536 ntBASIC18.9■□□□□ 0.62
FAM228BP0C875 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
FAM228BP0C875 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FAM228BP0C875 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 AC113347.1-201ENST00000413321 391 ntBASIC18.89■□□□□ 0.61
FAM228BP0C875 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.89■□□□□ 0.61
FAM228BP0C875 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.89■□□□□ 0.61
FAM228BP0C875 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.89■□□□□ 0.61
FAM228BP0C875 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.89■□□□□ 0.61
FAM228BP0C875 AL353692.3-201ENST00000407031 1396 ntBASIC18.89■□□□□ 0.61
FAM228BP0C875 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FAM228BP0C875 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FAM228BP0C875 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.89■□□□□ 0.61
FAM228BP0C875 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
FAM228BP0C875 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
FAM228BP0C875 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
FAM228BP0C875 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM228BP0C875 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM228BP0C875 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM228BP0C875 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 MIR662-201ENST00000384847 95 ntBASIC18.88■□□□□ 0.61
FAM228BP0C875 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 FAM8A6P-201ENST00000407496 1135 ntBASIC18.88■□□□□ 0.61
FAM228BP0C875 AC117947.1-201ENST00000427448 529 ntBASIC18.88■□□□□ 0.61
FAM228BP0C875 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM228BP0C875 BX664615.1-201ENST00000443558 458 ntBASIC18.88■□□□□ 0.61
FAM228BP0C875 KRT18P38-201ENST00000449496 1282 ntBASIC18.88■□□□□ 0.61
FAM228BP0C875 AC068472.1-201ENST00000474589 881 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms