Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC172P0C7W6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.19■□□□□ 0.66
CCDC172P0C7W6 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.19■□□□□ 0.66
CCDC172P0C7W6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 AC005363.2-201ENST00000618631 242 ntBASIC19.19■□□□□ 0.66
CCDC172P0C7W6 AC009154.2-201ENST00000621177 724 ntBASIC19.19■□□□□ 0.66
CCDC172P0C7W6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC172P0C7W6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 AL137013.1-201ENST00000432946 1228 ntBASIC19.18■□□□□ 0.66
CCDC172P0C7W6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC172P0C7W6 HLA-J-201ENST00000462773 1622 ntBASIC19.18■□□□□ 0.66
CCDC172P0C7W6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 AC113347.1-201ENST00000413321 391 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 HLA-F-220ENST00000434407 884 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms