Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC6P09630 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC6P09630 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC6P09630 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
HOXC6P09630 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 AP002414.1-201ENST00000391405 1147 ntBASIC19.91■□□□□ 0.78
HOXC6P09630 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC6P09630 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC6P09630 ACTG1P14-201ENST00000446382 1122 ntBASIC19.91■□□□□ 0.78
HOXC6P09630 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC6P09630 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.91■□□□□ 0.78
HOXC6P09630 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC6P09630 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC6P09630 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC6P09630 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 AC004877.2-201ENST00000623941 599 ntBASIC19.91■□□□□ 0.78
HOXC6P09630 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 WIZP1-201ENST00000531444 2299 ntBASIC19.91■□□□□ 0.78
HOXC6P09630 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC6P09630 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HOXC6P09630 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
HOXC6P09630 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC6P09630 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC6P09630 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.9■□□□□ 0.78
HOXC6P09630 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 KRT19P2-202ENST00000557173 1012 ntBASIC19.9■□□□□ 0.78
HOXC6P09630 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC6P09630 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC6P09630 AC027612.4-201ENST00000605371 583 ntBASIC19.9■□□□□ 0.78
HOXC6P09630 AL353135.1-201ENST00000606729 504 ntBASIC19.9■□□□□ 0.78
HOXC6P09630 GGTLC5P-201ENST00000617623 998 ntBASIC19.9■□□□□ 0.78
HOXC6P09630 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HOXC6P09630 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC6P09630 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC6P09630 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HOXC6P09630 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.89■□□□□ 0.78
HOXC6P09630 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOXC6P09630 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
HOXC6P09630 PTCHD3P3-201ENST00000403073 906 ntBASIC19.89■□□□□ 0.77
HOXC6P09630 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC6P09630 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
HOXC6P09630 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 AC109462.3-201ENST00000573934 613 ntBASIC19.89■□□□□ 0.77
HOXC6P09630 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
HOXC6P09630 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC6P09630 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC6P09630 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms