Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.69■□□□□ 0.42
COL4A2P08572 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A2P08572 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL4A2P08572 MYCLP1-201ENST00000372451 1075 ntBASIC17.69■□□□□ 0.42
COL4A2P08572 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 AL513480.1-201ENST00000451731 511 ntBASIC17.69■□□□□ 0.42
COL4A2P08572 COX20P2-201ENST00000452636 358 ntBASIC17.69■□□□□ 0.42
COL4A2P08572 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A2P08572 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COL4A2P08572 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
COL4A2P08572 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
COL4A2P08572 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A2P08572 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A2P08572 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
COL4A2P08572 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A2P08572 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A2P08572 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A2P08572 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.68■□□□□ 0.42
COL4A2P08572 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A2P08572 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.68■□□□□ 0.42
COL4A2P08572 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.68■□□□□ 0.42
COL4A2P08572 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A2P08572 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A2P08572 AC116407.2-201ENST00000613639 860 ntBASIC17.68■□□□□ 0.42
COL4A2P08572 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COL4A2P08572 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.68■□□□□ 0.42
COL4A2P08572 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.68■□□□□ 0.42
COL4A2P08572 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
COL4A2P08572 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
COL4A2P08572 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A2P08572 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A2P08572 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.67■□□□□ 0.42
COL4A2P08572 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.67■□□□□ 0.42
COL4A2P08572 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COL4A2P08572 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COL4A2P08572 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.67■□□□□ 0.42
COL4A2P08572 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A2P08572 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A2P08572 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.67■□□□□ 0.42
COL4A2P08572 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A2P08572 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A2P08572 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A2P08572 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A2P08572 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 REXO1L11P-201ENST00000620964 1927 ntBASIC17.66■□□□□ 0.42
COL4A2P08572 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A2P08572 AL355306.1-201ENST00000415580 579 ntBASIC17.66■□□□□ 0.42
COL4A2P08572 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.66■□□□□ 0.42
COL4A2P08572 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.66■□□□□ 0.42
COL4A2P08572 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms