Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.88■□□□□ 0.45
SRPRAP08240 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRPRAP08240 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 ABALON-201ENST00000629058 1903 ntBASIC17.88■□□□□ 0.45
SRPRAP08240 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SRPRAP08240 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SRPRAP08240 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.87■□□□□ 0.45
SRPRAP08240 AC003669.1-201ENST00000334569 611 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.87■□□□□ 0.45
SRPRAP08240 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.87■□□□□ 0.45
SRPRAP08240 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.87■□□□□ 0.45
SRPRAP08240 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.87■□□□□ 0.45
SRPRAP08240 IGHV3-52-201ENST00000519770 353 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.87■□□□□ 0.45
SRPRAP08240 AC109462.3-201ENST00000573934 613 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.87■□□□□ 0.45
SRPRAP08240 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.87■□□□□ 0.45
SRPRAP08240 AC008735.5-201ENST00000623544 497 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 AC104581.1-202ENST00000635932 2618 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 BICD1-207ENST00000551848 1962 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.87■□□□□ 0.45
SRPRAP08240 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.87■□□□□ 0.45
SRPRAP08240 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SRPRAP08240 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRPRAP08240 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.87■□□□□ 0.45
SRPRAP08240 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 AC132938.5-201ENST00000624980 1813 ntBASIC17.86■□□□□ 0.45
SRPRAP08240 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
SRPRAP08240 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 KLF4P1-201ENST00000412782 1185 ntBASIC17.86■□□□□ 0.45
SRPRAP08240 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SRPRAP08240 AC002558.1-201ENST00000488906 803 ntBASIC17.86■□□□□ 0.45
SRPRAP08240 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.86■□□□□ 0.45
SRPRAP08240 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.86■□□□□ 0.45
SRPRAP08240 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
SRPRAP08240 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.86■□□□□ 0.45
SRPRAP08240 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SRPRAP08240 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SRPRAP08240 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRPRAP08240 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.86■□□□□ 0.45
SRPRAP08240 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.85■□□□□ 0.45
SRPRAP08240 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SRPRAP08240 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
SRPRAP08240 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.85■□□□□ 0.45
SRPRAP08240 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.85■□□□□ 0.45
SRPRAP08240 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.85■□□□□ 0.45
SRPRAP08240 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.85■□□□□ 0.45
SRPRAP08240 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SRPRAP08240 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.85■□□□□ 0.45
SRPRAP08240 AF228730.7-201ENST00000641842 219 ntBASIC17.85■□□□□ 0.45
SRPRAP08240 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRPRAP08240 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.84■□□□□ 0.45
SRPRAP08240 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SRPRAP08240 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.84■□□□□ 0.45
SRPRAP08240 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SRPRAP08240 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.84■□□□□ 0.45
SRPRAP08240 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRPRAP08240 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRPRAP08240 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms