Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC1P07992 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC1P07992 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC1P07992 AL136038.4-201ENST00000603606 1261 ntBASIC15.76■□□□□ 0.11
ERCC1P07992 AC010240.3-201ENST00000607688 395 ntBASIC15.76■□□□□ 0.11
ERCC1P07992 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC1P07992 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC1P07992 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ERCC1P07992 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC1P07992 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC1P07992 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 SDHAP2-201ENST00000455183 2001 ntBASIC15.75■□□□□ 0.11
ERCC1P07992 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ERCC1P07992 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
ERCC1P07992 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 KRT18P55-202ENST00000578578 1546 ntBASIC15.75■□□□□ 0.11
ERCC1P07992 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.75■□□□□ 0.11
ERCC1P07992 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.75■□□□□ 0.11
ERCC1P07992 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.75■□□□□ 0.11
ERCC1P07992 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.75■□□□□ 0.11
ERCC1P07992 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.75■□□□□ 0.11
ERCC1P07992 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.75■□□□□ 0.11
ERCC1P07992 AL157888.1-201ENST00000631930 593 ntBASIC15.75■□□□□ 0.11
ERCC1P07992 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.75■□□□□ 0.11
ERCC1P07992 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.75■□□□□ 0.11
ERCC1P07992 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
ERCC1P07992 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
ERCC1P07992 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ERCC1P07992 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
ERCC1P07992 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
ERCC1P07992 AC099398.1-201ENST00000567919 2776 ntBASIC15.74■□□□□ 0.11
ERCC1P07992 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.74■□□□□ 0.11
ERCC1P07992 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ERCC1P07992 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 BX276092.5-203ENST00000456199 560 ntBASIC15.74■□□□□ 0.11
ERCC1P07992 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.74■□□□□ 0.11
ERCC1P07992 AL121672.3-201ENST00000608644 468 ntBASIC15.74■□□□□ 0.11
ERCC1P07992 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 HYMAI.1-201ENST00000620949 238 ntBASIC15.74■□□□□ 0.11
ERCC1P07992 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 AC093010.1-201ENST00000473625 1624 ntBASIC15.74■□□□□ 0.11
ERCC1P07992 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ERCC1P07992 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.74■□□□□ 0.11
ERCC1P07992 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.74■□□□□ 0.11
ERCC1P07992 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERCC1P07992 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC1P07992 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERCC1P07992 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.73■□□□□ 0.11
ERCC1P07992 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC1P07992 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
ERCC1P07992 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC1P07992 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERCC1P07992 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms