Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 AL163051.1-201ENST00000569214 1512 ntBASIC15.98■□□□□ 0.15
HLA-DPB1P04440 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DPB1P04440 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DPB1P04440 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 AC036111.1-201ENST00000533973 1582 ntBASIC15.96■□□□□ 0.15
HLA-DPB1P04440 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.96■□□□□ 0.15
HLA-DPB1P04440 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DPB1P04440 AC099343.3-201ENST00000605834 2503 ntBASIC15.96■□□□□ 0.14
HLA-DPB1P04440 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.96■□□□□ 0.14
HLA-DPB1P04440 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
HLA-DPB1P04440 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPB1P04440 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DPB1P04440 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 AC018695.7-201ENST00000624587 2492 ntBASIC15.95■□□□□ 0.14
HLA-DPB1P04440 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPB1P04440 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms