Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC116407.3-201ENST00000623905 1129 ntBASIC18.54■□□□□ 0.56
LMNAP02545 FAM215A-202ENST00000632077 792 ntBASIC18.54■□□□□ 0.56
LMNAP02545 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LMNAP02545 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
LMNAP02545 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LMNAP02545 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LMNAP02545 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LMNAP02545 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.53■□□□□ 0.56
LMNAP02545 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 DNAJB3-201ENST00000446806 729 ntBASIC18.53■□□□□ 0.56
LMNAP02545 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.53■□□□□ 0.56
LMNAP02545 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
LMNAP02545 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LMNAP02545 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LMNAP02545 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
LMNAP02545 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.52■□□□□ 0.56
LMNAP02545 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LMNAP02545 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 MED15P5-201ENST00000423150 992 ntBASIC18.52■□□□□ 0.56
LMNAP02545 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 SCARNA2-201ENST00000458748 420 ntBASIC18.52■□□□□ 0.56
LMNAP02545 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LMNAP02545 RN7SL606P-201ENST00000472779 293 ntBASIC18.52■□□□□ 0.56
LMNAP02545 AP005901.3-202ENST00000581653 237 ntBASIC18.52■□□□□ 0.56
LMNAP02545 AL356488.2-201ENST00000602755 427 ntBASIC18.52■□□□□ 0.56
LMNAP02545 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.52■□□□□ 0.56
LMNAP02545 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.52■□□□□ 0.56
LMNAP02545 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LMNAP02545 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LMNAP02545 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.52■□□□□ 0.55
LMNAP02545 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.52■□□□□ 0.55
LMNAP02545 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 KRT18P23-201ENST00000435622 1283 ntBASIC18.51■□□□□ 0.55
LMNAP02545 AL591424.1-201ENST00000442569 1213 ntBASIC18.51■□□□□ 0.55
LMNAP02545 AC112482.1-201ENST00000492080 688 ntBASIC18.51■□□□□ 0.55
LMNAP02545 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.51■□□□□ 0.55
LMNAP02545 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms