Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 MIR661-201ENST00000384842 89 ntBASIC20.08■□□□□ 0.81
ALDH1A1P00352 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 KRT18P32-201ENST00000424695 1287 ntBASIC20.08■□□□□ 0.81
ALDH1A1P00352 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 AC007274.1-201ENST00000439805 662 ntBASIC20.08■□□□□ 0.81
ALDH1A1P00352 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 KRT8P48-201ENST00000515599 1220 ntBASIC20.08■□□□□ 0.81
ALDH1A1P00352 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.08■□□□□ 0.81
ALDH1A1P00352 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALDH1A1P00352 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.08■□□□□ 0.8
ALDH1A1P00352 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
ALDH1A1P00352 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALDH1A1P00352 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALDH1A1P00352 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALDH1A1P00352 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ALDH1A1P00352 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 AC140878.1-201ENST00000565277 250 ntBASIC20.07■□□□□ 0.8
ALDH1A1P00352 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALDH1A1P00352 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.07■□□□□ 0.8
ALDH1A1P00352 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 AC005082.1-201ENST00000413042 2259 ntBASIC20.06■□□□□ 0.8
ALDH1A1P00352 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 OR8S1-201ENST00000310194 1080 ntBASIC20.06■□□□□ 0.8
ALDH1A1P00352 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 HLA-V-201ENST00000429037 534 ntBASIC20.06■□□□□ 0.8
ALDH1A1P00352 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 ACTL9-202ENST00000612068 1252 ntBASIC20.06■□□□□ 0.8
ALDH1A1P00352 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALDH1A1P00352 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ALDH1A1P00352 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms