Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LGI1O95970 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LGI1O95970 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 STARP1-201ENST00000397973 869 ntBASIC16.39■□□□□ 0.21
LGI1O95970 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.39■□□□□ 0.21
LGI1O95970 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.39■□□□□ 0.21
LGI1O95970 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LGI1O95970 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 AC139887.4-201ENST00000607877 719 ntBASIC16.39■□□□□ 0.21
LGI1O95970 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.39■□□□□ 0.21
LGI1O95970 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
LGI1O95970 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
LGI1O95970 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LGI1O95970 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LGI1O95970 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LGI1O95970 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.38■□□□□ 0.21
LGI1O95970 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LGI1O95970 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.38■□□□□ 0.21
LGI1O95970 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 TSPY12P-201ENST00000421279 868 ntBASIC16.38■□□□□ 0.21
LGI1O95970 SPDYE15P-201ENST00000424157 909 ntBASIC16.38■□□□□ 0.21
LGI1O95970 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 AC112698.1-201ENST00000510299 916 ntBASIC16.38■□□□□ 0.21
LGI1O95970 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.38■□□□□ 0.21
LGI1O95970 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.38■□□□□ 0.21
LGI1O95970 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.38■□□□□ 0.21
LGI1O95970 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.38■□□□□ 0.21
LGI1O95970 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LGI1O95970 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LGI1O95970 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGI1O95970 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
LGI1O95970 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.37■□□□□ 0.21
LGI1O95970 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.37■□□□□ 0.21
LGI1O95970 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.37■□□□□ 0.21
LGI1O95970 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 AC006011.2-201ENST00000621313 1158 ntBASIC16.37■□□□□ 0.21
LGI1O95970 AC011558.1-201ENST00000623459 338 ntBASIC16.37■□□□□ 0.21
LGI1O95970 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.37■□□□□ 0.21
LGI1O95970 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.37■□□□□ 0.21
LGI1O95970 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.37■□□□□ 0.21
LGI1O95970 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGI1O95970 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LGI1O95970 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms