Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.36■□□□□ 0.21
NKX2-2O95096 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NKX2-2O95096 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NKX2-2O95096 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 TOB2P1-201ENST00000469761 992 ntBASIC16.36■□□□□ 0.21
NKX2-2O95096 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.36■□□□□ 0.21
NKX2-2O95096 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.36■□□□□ 0.21
NKX2-2O95096 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NKX2-2O95096 Z69720.1-201ENST00000601483 472 ntBASIC16.36■□□□□ 0.21
NKX2-2O95096 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NKX2-2O95096 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.36■□□□□ 0.21
NKX2-2O95096 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX2-2O95096 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NKX2-2O95096 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NKX2-2O95096 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 FAM220CP-201ENST00000395253 831 ntBASIC16.35■□□□□ 0.21
NKX2-2O95096 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
NKX2-2O95096 ATP5G2P1-201ENST00000433580 426 ntBASIC16.35■□□□□ 0.21
NKX2-2O95096 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.35■□□□□ 0.21
NKX2-2O95096 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX2-2O95096 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.35■□□□□ 0.21
NKX2-2O95096 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NKX2-2O95096 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.35■□□□□ 0.21
NKX2-2O95096 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX2-2O95096 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX2-2O95096 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX2-2O95096 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NKX2-2O95096 PP12613-201ENST00000424958 2230 ntBASIC16.34■□□□□ 0.21
NKX2-2O95096 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 KRT17P6-201ENST00000453795 1220 ntBASIC16.34■□□□□ 0.21
NKX2-2O95096 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.34■□□□□ 0.21
NKX2-2O95096 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 AC019129.2-201ENST00000609837 1235 ntBASIC16.34■□□□□ 0.21
NKX2-2O95096 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NKX2-2O95096 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NKX2-2O95096 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX2-2O95096 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.33■□□□□ 0.21
NKX2-2O95096 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX2-2O95096 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX2-2O95096 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX2-2O95096 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NKX2-2O95096 IGHV3-47-201ENST00000425060 335 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms