Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 VENTXP7-201ENST00000475503 772 ntBASIC20.62■□□□□ 0.89
CDKL5O76039 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL5O76039 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.62■□□□□ 0.89
CDKL5O76039 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDKL5O76039 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKL5O76039 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL5O76039 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL5O76039 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKL5O76039 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL5O76039 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKL5O76039 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 IER3-202ENST00000376377 1350 ntBASIC20.61■□□□□ 0.89
CDKL5O76039 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKL5O76039 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKL5O76039 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDKL5O76039 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKL5O76039 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDKL5O76039 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDKL5O76039 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.61■□□□□ 0.89
CDKL5O76039 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.61■□□□□ 0.89
CDKL5O76039 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.61■□□□□ 0.89
CDKL5O76039 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.61■□□□□ 0.89
CDKL5O76039 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKL5O76039 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CDKL5O76039 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDKL5O76039 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDKL5O76039 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKL5O76039 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.6■□□□□ 0.89
CDKL5O76039 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.6■□□□□ 0.89
CDKL5O76039 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDKL5O76039 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDKL5O76039 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKL5O76039 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKL5O76039 AC016734.2-201ENST00000624325 1377 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL5O76039 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDKL5O76039 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL5O76039 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL5O76039 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKL5O76039 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL5O76039 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CDKL5O76039 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 COX5BP2-201ENST00000392354 334 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 AL845331.1-201ENST00000424978 1190 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 TSSC2-201ENST00000450217 709 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.59■□□□□ 0.89
CDKL5O76039 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKL5O76039 AC125634.1-201ENST00000438758 1403 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKL5O76039 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDKL5O76039 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 AC010460.3-201ENST00000511359 1579 ntBASIC20.59■□□□□ 0.89
CDKL5O76039 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL5O76039 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms