Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLPXO76031 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPXO76031 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLPXO76031 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLPXO76031 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.14■□□□□ 0.17
CLPXO76031 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.14■□□□□ 0.17
CLPXO76031 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.14■□□□□ 0.17
CLPXO76031 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CLPXO76031 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPXO76031 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLPXO76031 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLPXO76031 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CLPXO76031 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPXO76031 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPXO76031 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.14■□□□□ 0.17
CLPXO76031 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPXO76031 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
CLPXO76031 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 AC023824.1-201ENST00000562945 2975 ntBASIC16.13■□□□□ 0.17
CLPXO76031 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPXO76031 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 MIR4497-201ENST00000583208 89 ntBASIC16.13■□□□□ 0.17
CLPXO76031 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPXO76031 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPXO76031 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLPXO76031 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPXO76031 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.12■□□□□ 0.17
CLPXO76031 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLPXO76031 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPXO76031 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPXO76031 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLPXO76031 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLPXO76031 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
CLPXO76031 AC006449.5-201ENST00000610658 2098 ntBASIC16.12■□□□□ 0.17
CLPXO76031 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
CLPXO76031 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPXO76031 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CLPXO76031 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPXO76031 AL136379.1-201ENST00000623471 2642 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms