Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
GMDSO60547 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.74■□□□□ 0.11
GMDSO60547 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.74■□□□□ 0.11
GMDSO60547 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.74■□□□□ 0.11
GMDSO60547 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.74■□□□□ 0.11
GMDSO60547 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.74■□□□□ 0.11
GMDSO60547 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.74■□□□□ 0.11
GMDSO60547 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
GMDSO60547 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.74■□□□□ 0.11
GMDSO60547 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.74■□□□□ 0.11
GMDSO60547 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GMDSO60547 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GMDSO60547 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GMDSO60547 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.74■□□□□ 0.11
GMDSO60547 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.73■□□□□ 0.11
GMDSO60547 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.73■□□□□ 0.11
GMDSO60547 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.73■□□□□ 0.11
GMDSO60547 AC010203.1-204ENST00000548782 407 ntBASIC15.73■□□□□ 0.11
GMDSO60547 AC140113.3-201ENST00000605663 199 ntBASIC15.73■□□□□ 0.11
GMDSO60547 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 AC092865.7-201ENST00000641832 219 ntBASIC15.73■□□□□ 0.11
GMDSO60547 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
GMDSO60547 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GMDSO60547 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.73■□□□□ 0.11
GMDSO60547 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GMDSO60547 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.72■□□□□ 0.11
GMDSO60547 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.72■□□□□ 0.11
GMDSO60547 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GMDSO60547 TERF1P1-201ENST00000311003 1181 ntBASIC15.72■□□□□ 0.11
GMDSO60547 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GMDSO60547 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.72■□□□□ 0.11
GMDSO60547 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.72■□□□□ 0.11
GMDSO60547 BX664615.1-201ENST00000443558 458 ntBASIC15.72■□□□□ 0.11
GMDSO60547 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.72■□□□□ 0.11
GMDSO60547 SEC1P-202ENST00000473944 940 ntBASIC15.72■□□□□ 0.11
GMDSO60547 COX11P1-201ENST00000489116 835 ntBASIC15.72■□□□□ 0.11
GMDSO60547 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GMDSO60547 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
GMDSO60547 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.72■□□□□ 0.11
GMDSO60547 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms