Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 RPS2P28-201ENST00000314255 741 ntBASIC18.13■□□□□ 0.49
SYNCRIPO60506 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 FGFR3P6-201ENST00000457012 610 ntBASIC18.13■□□□□ 0.49
SYNCRIPO60506 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 AP001269.4-201ENST00000609611 512 ntBASIC18.13■□□□□ 0.49
SYNCRIPO60506 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SYNCRIPO60506 ESPNP-201ENST00000270691 2015 ntBASIC18.13■□□□□ 0.49
SYNCRIPO60506 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNCRIPO60506 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 AL133373.2-201ENST00000623187 2828 ntBASIC18.12■□□□□ 0.49
SYNCRIPO60506 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 IL9RP2-201ENST00000423948 1312 ntBASIC18.12■□□□□ 0.49
SYNCRIPO60506 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNCRIPO60506 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNCRIPO60506 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 NOC2LP1-202ENST00000452600 2235 ntBASIC18.11■□□□□ 0.49
SYNCRIPO60506 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 ABCD1P5-201ENST00000445663 754 ntBASIC18.11■□□□□ 0.49
SYNCRIPO60506 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 AC148477.8-201ENST00000624298 468 ntBASIC18.11■□□□□ 0.49
SYNCRIPO60506 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.11■□□□□ 0.49
SYNCRIPO60506 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNCRIPO60506 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNCRIPO60506 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 ABALON-201ENST00000629058 1903 ntBASIC18.1■□□□□ 0.49
SYNCRIPO60506 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms