Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGA12O60330 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 AC034105.1-201ENST00000563488 319 ntBASIC17.58■□□□□ 0.4
PCDHGA12O60330 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 AC008735.5-201ENST00000623544 497 ntBASIC17.58■□□□□ 0.4
PCDHGA12O60330 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA12O60330 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA12O60330 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 LINC00602-201ENST00000629776 2065 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 AC098831.1-202ENST00000438821 336 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 AL356488.2-201ENST00000602755 427 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 AC025062.2-201ENST00000605477 670 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 Z83851.2-201ENST00000609564 659 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 FZD10-202ENST00000539839 3282 ntBASIC17.57■□□□□ 0.4
PCDHGA12O60330 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHGA12O60330 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA12O60330 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 UPF3AP3-201ENST00000420996 769 ntBASIC17.56■□□□□ 0.4
PCDHGA12O60330 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 AC092910.1-201ENST00000482027 1129 ntBASIC17.56■□□□□ 0.4
PCDHGA12O60330 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 AL691403.2-201ENST00000618460 490 ntBASIC17.56■□□□□ 0.4
PCDHGA12O60330 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA12O60330 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA12O60330 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms