Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH7O60245 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDH7O60245 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH7O60245 AL671277.2-201ENST00000458060 996 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 DUX4L26-201ENST00000489078 1255 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH7O60245 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH7O60245 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH7O60245 LINC01238-205ENST00000567549 1107 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 RNF126P1-202ENST00000569893 925 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH7O60245 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH7O60245 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH7O60245 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH7O60245 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH7O60245 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.96■□□□□ 0.3
PCDH7O60245 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH7O60245 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH7O60245 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PCDH7O60245 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH7O60245 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH7O60245 AL138688.1-201ENST00000624851 1594 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDH7O60245 TMPOP1-202ENST00000424642 1267 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 SPDYE13P-201ENST00000445314 798 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 MTCL1P1-201ENST00000446207 792 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH7O60245 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH7O60245 LINC01451-201ENST00000623792 534 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH7O60245 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH7O60245 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PCDH7O60245 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH7O60245 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH7O60245 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PCDH7O60245 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 AC012313.1-201ENST00000593393 3059 ntBASIC16.95■□□□□ 0.3
PCDH7O60245 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH7O60245 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 AC068472.1-201ENST00000474589 881 ntBASIC16.94■□□□□ 0.3
PCDH7O60245 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH7O60245 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH7O60245 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.94■□□□□ 0.3
PCDH7O60245 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH7O60245 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDH7O60245 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 AC108860.2-201ENST00000562760 2183 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms