Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 AKR1C7P-201ENST00000305623 895 ntBASIC22■■□□□ 1.11
SRGAP3O43295 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22■■□□□ 1.11
SRGAP3O43295 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22■■□□□ 1.11
SRGAP3O43295 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22■■□□□ 1.11
SRGAP3O43295 EMBP1-201ENST00000458200 901 ntBASIC22■■□□□ 1.11
SRGAP3O43295 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 RN7SL510P-201ENST00000581311 263 ntBASIC22■■□□□ 1.11
SRGAP3O43295 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22■■□□□ 1.11
SRGAP3O43295 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22■■□□□ 1.11
SRGAP3O43295 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SRGAP3O43295 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22■■□□□ 1.11
SRGAP3O43295 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SRGAP3O43295 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.99■■□□□ 1.11
SRGAP3O43295 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.99■■□□□ 1.11
SRGAP3O43295 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 REXO1L6P-202ENST00000619970 1078 ntBASIC21.99■■□□□ 1.11
SRGAP3O43295 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.99■■□□□ 1.11
SRGAP3O43295 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.99■■□□□ 1.11
SRGAP3O43295 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SRGAP3O43295 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SRGAP3O43295 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
SRGAP3O43295 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.98■■□□□ 1.11
SRGAP3O43295 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 AP001269.4-201ENST00000609611 512 ntBASIC21.98■■□□□ 1.11
SRGAP3O43295 AC019129.2-201ENST00000609837 1235 ntBASIC21.98■■□□□ 1.11
SRGAP3O43295 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.98■■□□□ 1.11
SRGAP3O43295 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SRGAP3O43295 AL049757.1-201ENST00000616842 1596 ntBASIC21.98■■□□□ 1.11
SRGAP3O43295 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.98■■□□□ 1.11
SRGAP3O43295 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SRGAP3O43295 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SRGAP3O43295 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 AL355312.1-201ENST00000407115 2176 ntBASIC21.97■■□□□ 1.11
SRGAP3O43295 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SRGAP3O43295 AC103564.2-201ENST00000432853 1299 ntBASIC21.97■■□□□ 1.11
SRGAP3O43295 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.97■■□□□ 1.11
SRGAP3O43295 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SRGAP3O43295 AL691432.3-201ENST00000621860 400 ntBASIC21.97■■□□□ 1.11
SRGAP3O43295 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SRGAP3O43295 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms