Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN3O15551 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN3O15551 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN3O15551 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN3O15551 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN3O15551 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN3O15551 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN3O15551 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN3O15551 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN3O15551 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CLDN3O15551 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN3O15551 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN3O15551 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN3O15551 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN3O15551 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN3O15551 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN3O15551 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN3O15551 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN3O15551 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN3O15551 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 COX5BP2-201ENST00000392354 334 ntBASIC19.37■□□□□ 0.69
CLDN3O15551 DDX43P3-201ENST00000441064 443 ntBASIC19.37■□□□□ 0.69
CLDN3O15551 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.37■□□□□ 0.69
CLDN3O15551 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN3O15551 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN3O15551 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN3O15551 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN3O15551 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN3O15551 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLDN3O15551 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN3O15551 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN3O15551 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN3O15551 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 RN7SL510P-201ENST00000581311 263 ntBASIC19.36■□□□□ 0.69
CLDN3O15551 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN3O15551 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLDN3O15551 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CLDN3O15551 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN3O15551 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLDN3O15551 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLDN3O15551 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN3O15551 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CLDN3O15551 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN3O15551 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN3O15551 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms