Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.47■□□□□ 0.55
TRANK1O15050 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRANK1O15050 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 AC003669.1-201ENST00000334569 611 ntBASIC18.46■□□□□ 0.55
TRANK1O15050 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 AL355306.1-201ENST00000415580 579 ntBASIC18.46■□□□□ 0.55
TRANK1O15050 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 SERBP1P5-201ENST00000510079 1181 ntBASIC18.46■□□□□ 0.55
TRANK1O15050 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.46■□□□□ 0.55
TRANK1O15050 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.46■□□□□ 0.55
TRANK1O15050 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.46■□□□□ 0.55
TRANK1O15050 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRANK1O15050 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRANK1O15050 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.46■□□□□ 0.54
TRANK1O15050 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
TRANK1O15050 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRANK1O15050 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRANK1O15050 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRANK1O15050 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.45■□□□□ 0.54
TRANK1O15050 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.45■□□□□ 0.54
TRANK1O15050 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.45■□□□□ 0.54
TRANK1O15050 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.45■□□□□ 0.54
TRANK1O15050 AC084121.4-201ENST00000641598 221 ntBASIC18.45■□□□□ 0.54
TRANK1O15050 AF228730.8-201ENST00000642140 221 ntBASIC18.45■□□□□ 0.54
TRANK1O15050 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 AC093010.1-201ENST00000473625 1624 ntBASIC18.45■□□□□ 0.54
TRANK1O15050 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 DDX43P3-201ENST00000441064 443 ntBASIC18.45■□□□□ 0.54
TRANK1O15050 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.45■□□□□ 0.54
TRANK1O15050 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.45■□□□□ 0.54
TRANK1O15050 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRANK1O15050 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 AC008677.1-201ENST00000519230 1561 ntBASIC18.44■□□□□ 0.54
TRANK1O15050 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.44■□□□□ 0.54
TRANK1O15050 AC140878.1-201ENST00000565277 250 ntBASIC18.44■□□□□ 0.54
TRANK1O15050 LINC02560-201ENST00000596379 459 ntBASIC18.44■□□□□ 0.54
TRANK1O15050 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.44■□□□□ 0.54
TRANK1O15050 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.44■□□□□ 0.54
TRANK1O15050 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRANK1O15050 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.44■□□□□ 0.54
TRANK1O15050 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.44■□□□□ 0.54
TRANK1O15050 AL596325.1-201ENST00000563991 1082 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms