Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 AL138781.2-201ENST00000617896 1843 ntBASIC20.24■□□□□ 0.83
ATP2A1O14983 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2A1O14983 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ATP2A1O14983 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2A1O14983 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2A1O14983 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 BX276092.7-203ENST00000637198 1536 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2A1O14983 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 MIR1233-2-201ENST00000408138 82 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 MIR1233-1-201ENST00000408722 82 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP2A1O14983 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.23■□□□□ 0.83
ATP2A1O14983 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP2A1O14983 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP2A1O14983 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP2A1O14983 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2A1O14983 AC005593.1-201ENST00000624894 515 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2A1O14983 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 AC148477.5-201ENST00000625164 1645 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A1O14983 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2A1O14983 AC100803.2-201ENST00000562459 1963 ntBASIC20.23■□□□□ 0.83
ATP2A1O14983 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A1O14983 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP2A1O14983 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP2A1O14983 AC040169.1-201ENST00000565382 521 ntBASIC20.22■□□□□ 0.83
ATP2A1O14983 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A1O14983 AL139424.1-201ENST00000607572 797 ntBASIC20.22■□□□□ 0.83
ATP2A1O14983 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A1O14983 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A1O14983 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A1O14983 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.22■□□□□ 0.83
ATP2A1O14983 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A1O14983 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A1O14983 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A1O14983 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP2A1O14983 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A1O14983 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A1O14983 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATP2A1O14983 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A1O14983 KLF4P1-201ENST00000412782 1185 ntBASIC20.21■□□□□ 0.83
ATP2A1O14983 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A1O14983 SIGLEC30P-201ENST00000455569 941 ntBASIC20.21■□□□□ 0.83
ATP2A1O14983 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A1O14983 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
ATP2A1O14983 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A1O14983 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.21■□□□□ 0.83
ATP2A1O14983 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms