Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL21O00585 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCL21O00585 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL21O00585 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCL21O00585 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCL21O00585 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL21O00585 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCL21O00585 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL21O00585 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL21O00585 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 MIR770-201ENST00000390219 98 ntBASIC15.55■□□□□ 0.08
CCL21O00585 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL21O00585 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 FAM8A3P-201ENST00000427218 844 ntBASIC15.55■□□□□ 0.08
CCL21O00585 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL21O00585 STK19B-204ENST00000512515 211 ntBASIC15.55■□□□□ 0.08
CCL21O00585 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 PDPK2P-202ENST00000562415 1191 ntBASIC15.55■□□□□ 0.08
CCL21O00585 AC109462.3-201ENST00000573934 613 ntBASIC15.55■□□□□ 0.08
CCL21O00585 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL21O00585 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL21O00585 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 AL805961.1-202ENST00000641562 540 ntBASIC15.55■□□□□ 0.08
CCL21O00585 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CCL21O00585 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL21O00585 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL21O00585 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 AC096734.2-201ENST00000562054 433 ntBASIC15.54■□□□□ 0.08
CCL21O00585 AL031432.2-201ENST00000566714 459 ntBASIC15.54■□□□□ 0.08
CCL21O00585 AL928711.1-201ENST00000570165 459 ntBASIC15.54■□□□□ 0.08
CCL21O00585 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL21O00585 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL21O00585 GGTLC5P-201ENST00000617623 998 ntBASIC15.54■□□□□ 0.08
CCL21O00585 AC010507.1-201ENST00000633895 436 ntBASIC15.54■□□□□ 0.08
CCL21O00585 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL21O00585 AC020763.4-201ENST00000623414 4170 ntBASIC15.54■□□□□ 0.08
CCL21O00585 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL21O00585 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 AC097637.2-201ENST00000624096 1997 ntBASIC15.53■□□□□ 0.08
CCL21O00585 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 AC018445.3-201ENST00000624177 1945 ntBASIC15.53■□□□□ 0.08
CCL21O00585 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL21O00585 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms