Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDC7O00311 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDC7O00311 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 AL645929.1-201ENST00000420084 975 ntBASIC17.41■□□□□ 0.38
CDC7O00311 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.41■□□□□ 0.38
CDC7O00311 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDC7O00311 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 AC080080.1-201ENST00000625121 2420 ntBASIC17.41■□□□□ 0.38
CDC7O00311 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC7O00311 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC7O00311 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
CDC7O00311 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 AL023806.1-201ENST00000603994 1649 ntBASIC17.4■□□□□ 0.38
CDC7O00311 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDC7O00311 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC7O00311 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC7O00311 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC7O00311 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.4■□□□□ 0.38
CDC7O00311 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.4■□□□□ 0.38
CDC7O00311 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC7O00311 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC7O00311 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDC7O00311 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC7O00311 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
CDC7O00311 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CDC7O00311 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDC7O00311 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC7O00311 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC7O00311 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC7O00311 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC7O00311 LINC01238-205ENST00000567549 1107 ntBASIC17.39■□□□□ 0.37
CDC7O00311 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC7O00311 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC7O00311 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.39■□□□□ 0.37
CDC7O00311 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC7O00311 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDC7O00311 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC7O00311 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 BX276092.7-203ENST00000637198 1536 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms