Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
DDX39AO00148 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
DDX39AO00148 FAM197Y8-203ENST00000450145 560 ntBASIC19.95■□□□□ 0.78
DDX39AO00148 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
DDX39AO00148 FGFR3P6-201ENST00000457012 610 ntBASIC19.95■□□□□ 0.78
DDX39AO00148 AC079776.4-201ENST00000511039 504 ntBASIC19.95■□□□□ 0.78
DDX39AO00148 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX39AO00148 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.95■□□□□ 0.78
DDX39AO00148 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX39AO00148 SLC25A6P4-201ENST00000586535 553 ntBASIC19.95■□□□□ 0.78
DDX39AO00148 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX39AO00148 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 AL355877.3-201ENST00000622820 899 ntBASIC19.95■□□□□ 0.78
DDX39AO00148 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
DDX39AO00148 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX39AO00148 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX39AO00148 AC106795.1-205ENST00000512851 1056 ntBASIC19.94■□□□□ 0.78
DDX39AO00148 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
DDX39AO00148 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
DDX39AO00148 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX39AO00148 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DDX39AO00148 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX39AO00148 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX39AO00148 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
DDX39AO00148 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX39AO00148 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX39AO00148 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 AP005117.1-201ENST00000584346 1413 ntBASIC19.93■□□□□ 0.78
DDX39AO00148 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 AC007613.1-201ENST00000572811 2597 ntBASIC19.93■□□□□ 0.78
DDX39AO00148 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX39AO00148 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX39AO00148 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 AC116407.2-201ENST00000613639 860 ntBASIC19.93■□□□□ 0.78
DDX39AO00148 AC148477.8-201ENST00000624298 468 ntBASIC19.93■□□□□ 0.78
DDX39AO00148 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX39AO00148 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.93■□□□□ 0.78
DDX39AO00148 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX39AO00148 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX39AO00148 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX39AO00148 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms