Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TMEM238C9JI98 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.52□□□□□ -0.4
TMEM238C9JI98 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM238C9JI98 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM238C9JI98 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.52□□□□□ -0.4
TMEM238C9JI98 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM238C9JI98 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM238C9JI98 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM238C9JI98 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.52□□□□□ -0.4
TMEM238C9JI98 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
TMEM238C9JI98 AL499627.1-201ENST00000569373 2188 ntBASIC12.52□□□□□ -0.4
TMEM238C9JI98 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 TSPY21P-201ENST00000433481 731 ntBASIC12.52□□□□□ -0.41
TMEM238C9JI98 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 AC007950.2-201ENST00000615045 2347 ntBASIC12.52□□□□□ -0.41
TMEM238C9JI98 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM238C9JI98 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM238C9JI98 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 LINC00602-201ENST00000629776 2065 ntBASIC12.51□□□□□ -0.41
TMEM238C9JI98 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.51□□□□□ -0.41
TMEM238C9JI98 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM238C9JI98 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238C9JI98 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms