Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01548A6NM66 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01548A6NM66 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
LINC01548A6NM66 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC01548A6NM66 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14□□□□□ -0.17
LINC01548A6NM66 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC01548A6NM66 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01548A6NM66 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 RN7SL510P-201ENST00000581311 263 ntBASIC13.99□□□□□ -0.17
LINC01548A6NM66 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 AC116407.2-201ENST00000613639 860 ntBASIC13.99□□□□□ -0.17
LINC01548A6NM66 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 AC068880.1-201ENST00000507289 2297 ntBASIC13.99□□□□□ -0.17
LINC01548A6NM66 AC138932.1-201ENST00000534164 6830 ntBASIC13.99□□□□□ -0.17
LINC01548A6NM66 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC01548A6NM66 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01548A6NM66 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC006116.8-202ENST00000587620 1550 ntBASIC13.98□□□□□ -0.17
LINC01548A6NM66 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 COX5BP2-201ENST00000392354 334 ntBASIC13.98□□□□□ -0.17
LINC01548A6NM66 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms