Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 MTHFR-217ENST00000641820 1569 ntBASIC12.52□□□□□ -0.41
LINC01546A6NGU7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01546A6NGU7 AC099063.4-201ENST00000641099 1602 ntBASIC12.51□□□□□ -0.41
LINC01546A6NGU7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AL139327.4-201ENST00000612362 153 ntBASIC12.51□□□□□ -0.41
LINC01546A6NGU7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 AC092384.3-202ENST00000564646 2873 ntBASIC12.51□□□□□ -0.41
LINC01546A6NGU7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01546A6NGU7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 AC092850.2-201ENST00000623821 2697 ntBASIC12.5□□□□□ -0.41
LINC01546A6NGU7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01546A6NGU7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms