Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC009949.1-201ENST00000623048 1830 ntBASIC15.17■□□□□ 0.02
TMEM235A6NFC5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEM235A6NFC5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 FAM197Y4-202ENST00000622692 608 ntBASIC15.16■□□□□ 0.02
TMEM235A6NFC5 PCDHA14-201ENST00000506751 2298 ntBASIC15.16■□□□□ 0.02
TMEM235A6NFC5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 AGGF1P2-201ENST00000426656 2106 ntBASIC15.16■□□□□ 0.02
TMEM235A6NFC5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TMEM235A6NFC5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 LINC01451-201ENST00000623792 534 ntBASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 AL135905.2-201ENST00000584934 1404 ntBASIC15.15■□□□□ 0.02
TMEM235A6NFC5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM235A6NFC5 AC105020.1-201ENST00000435356 2205 ntBASIC15.15■□□□□ 0.02
TMEM235A6NFC5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
TMEM235A6NFC5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms