Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 AC022898.2-201ENST00000616822 1312 ntBASIC17.81■□□□□ 0.44
CCDC189A1A4V9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 MIR3917-201ENST00000580971 93 ntBASIC17.81■□□□□ 0.44
CCDC189A1A4V9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 AC006116.8-202ENST00000587620 1550 ntBASIC17.81■□□□□ 0.44
CCDC189A1A4V9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC189A1A4V9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 PVRIG2P-201ENST00000435460 978 ntBASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AC113404.2-201ENST00000507884 177 ntBASIC17.8■□□□□ 0.44
CCDC189A1A4V9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 FAM87A-204ENST00000613235 858 ntBASIC17.8■□□□□ 0.44
CCDC189A1A4V9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC189A1A4V9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 AC009947.2-201ENST00000444014 672 ntBASIC17.79■□□□□ 0.44
CCDC189A1A4V9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC189A1A4V9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC189A1A4V9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC189A1A4V9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC189A1A4V9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC189A1A4V9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms