Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM129A0AVI4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 KRT8P7-201ENST00000533003 1432 ntBASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM129A0AVI4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AL024508.2-201ENST00000607749 1894 ntBASIC16.04■□□□□ 0.16
TMEM129A0AVI4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 GCSHP2-201ENST00000560971 527 ntBASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC009065.1-201ENST00000564055 1225 ntBASIC16.04■□□□□ 0.16
TMEM129A0AVI4 LINC01238-205ENST00000567549 1107 ntBASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC100803.2-201ENST00000562459 1963 ntBASIC16.04■□□□□ 0.16
TMEM129A0AVI4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM129A0AVI4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms