Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 AC112907.2-201ENST00000448639 330 ntBASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 AP003733.1-201ENST00000491725 852 ntBASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 KRT18P55-202ENST00000578578 1546 ntBASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV4A0A0C4DH28 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 TSPY12P-201ENST00000421279 868 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 TMPOP1-202ENST00000424642 1267 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 DUTP2-201ENST00000519164 463 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 AC079602.3-201ENST00000623931 403 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 LINC01311-201ENST00000565162 1445 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV4A0A0C4DH28 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms