Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AC003669.1-201ENST00000334569 611 ntBASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 KRT18P13-201ENST00000400056 1290 ntBASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AC034105.1-201ENST00000563488 319 ntBASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AC109462.3-201ENST00000573934 613 ntBASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 AL356488.2-201ENST00000602755 427 ntBASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV19A0A0A6YYK7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 MED15P5-201ENST00000423150 992 ntBASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 IGHV3-52-201ENST00000519770 353 ntBASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 AC019129.2-201ENST00000609837 1235 ntBASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 AL589182.2-201ENST00000619332 1049 ntBASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV19A0A0A6YYK7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AP000997.3-201ENST00000623333 2250 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 KRT18P27-201ENST00000427733 1299 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AL591424.1-201ENST00000442569 1213 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 SIGLEC30P-201ENST00000455569 941 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 UNC93B6-202ENST00000528242 690 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AC092865.5-201ENST00000545435 363 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 FAM197Y3-203ENST00000618346 717 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AC005593.1-201ENST00000624894 515 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 PGM5P2-202ENST00000637225 1043 ntBASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV19A0A0A6YYK7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms