Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 FAM210CP-201ENST00000445714 574 ntBASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 DUTP2-201ENST00000519164 463 ntBASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DRB4X5D2U9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DRB4X5D2U9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DRB4X5D2U9 AC022898.2-201ENST00000616822 1312 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 MIR662-201ENST00000384847 95 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AL671277.2-201ENST00000458060 996 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AP003733.1-201ENST00000491725 852 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 HYMAI.1-201ENST00000620949 238 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AC132938.6-201ENST00000623828 1655 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 LINC00602-201ENST00000629776 2065 ntBASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DRB4X5D2U9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms