Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 CYP2T3P-201ENST00000601990 817 ntBASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 MIR6084-201ENST00000622012 110 ntBASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 LINC02228-204ENST00000642115 2962 ntBASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAPPC1Q9Y5R8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 TUBB8P6-201ENST00000436895 1288 ntBASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 RARRES2P4-201ENST00000514074 484 ntBASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAPPC1Q9Y5R8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 AC099063.4-201ENST00000641099 1602 ntBASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAPPC1Q9Y5R8 SBF1P1-201ENST00000444527 5631 ntBASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAPPC1Q9Y5R8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms