Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.98■□□□□ 0.47
RAI2Q9Y5P3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RAI2Q9Y5P3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.98■□□□□ 0.47
RAI2Q9Y5P3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 AC079776.4-201ENST00000511039 504 ntBASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 AL160237.2-201ENST00000556165 472 ntBASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 AC097374.2-201ENST00000618617 1306 ntBASIC17.97■□□□□ 0.47
RAI2Q9Y5P3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 AL133373.2-201ENST00000623187 2828 ntBASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 AC079781.3-201ENST00000449110 356 ntBASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 AL732292.2-201ENST00000609649 430 ntBASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
RAI2Q9Y5P3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAI2Q9Y5P3 AC006116.8-202ENST00000587620 1550 ntBASIC17.96■□□□□ 0.46
RAI2Q9Y5P3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RAI2Q9Y5P3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 DDX43P3-201ENST00000441064 443 ntBASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NUS1P1-201ENST00000446295 882 ntBASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RAI2Q9Y5P3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAI2Q9Y5P3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAI2Q9Y5P3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms