Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 AL022342.1-201ENST00000400363 863 ntBASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 AC091607.1-201ENST00000490318 1060 ntBASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 AC004263.2-201ENST00000617183 678 ntBASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA6Q9Y5G7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 NUS1P2-201ENST00000417358 873 ntBASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 AC064862.7-201ENST00000604520 867 ntBASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA6Q9Y5G7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 MRPL3P1-201ENST00000400109 1033 ntBASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 HLA-A-201ENST00000376802 1334 ntBASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA6Q9Y5G7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms