Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AL359075.1-203ENST00000462729 1002 ntBASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 GCSHP2-201ENST00000560971 527 ntBASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AL157888.1-201ENST00000631930 593 ntBASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB3Q9Y5G1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 PCED1CP-201ENST00000419887 785 ntBASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC022898.2-201ENST00000616822 1312 ntBASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 AC141586.5-201ENST00000624546 2050 ntBASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGB3Q9Y5G1 PCDHA12-202ENST00000613593 2588 ntBASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 UPK3BP1-201ENST00000428678 509 ntBASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms