Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 IGHV3-52-201ENST00000519770 353 ntBASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 REXO1L3P-201ENST00000622202 1288 ntBASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 AC009336.1-201ENST00000608941 1553 ntBASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 CXCL1P1-201ENST00000502804 216 ntBASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 AC068137.2-201ENST00000605408 478 ntBASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 PI4KAP1-204ENST00000612579 1703 ntBASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCBQ9Y3I0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 AC092474.2-201ENST00000424288 719 ntBASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 AC109322.1-201ENST00000524499 1264 ntBASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 AC022145.2-201ENST00000598203 171 ntBASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCBQ9Y3I0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 AL121761.2-201ENST00000598007 1648 ntBASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 AC244107.1-201ENST00000442033 332 ntBASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 PAWRP1-201ENST00000451083 565 ntBASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 BX276092.7-203ENST00000637198 1536 ntBASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCBQ9Y3I0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
RTCBQ9Y3I0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 AC023141.5-201ENST00000458585 616 ntBASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms