Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF11Q9Y3C5 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
RNF11Q9Y3C5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 KRT18P38-201ENST00000449496 1282 ntBASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 AC004263.2-201ENST00000617183 678 ntBASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF11Q9Y3C5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF11Q9Y3C5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 TSPY5P-201ENST00000426936 936 ntBASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 KRT18P48-201ENST00000434763 852 ntBASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 AC006011.2-201ENST00000621313 1158 ntBASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF11Q9Y3C5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 AL118508.1-201ENST00000613502 2345 ntBASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 RNF152P1-201ENST00000397754 604 ntBASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 KRT18P65-201ENST00000439811 1286 ntBASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF11Q9Y3C5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms