Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 AC010507.1-201ENST00000633895 436 ntBASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC27.27■■□□□ 1.96
CDK11AQ9UQ88 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CDK11AQ9UQ88 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
CDK11AQ9UQ88 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 CD82-202ENST00000342935 967 ntTSL 5 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 RHOQP3-201ENST00000437982 621 ntBASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 EFTUD1P1-204ENST00000560401 1798 ntBASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 AC097637.2-201ENST00000624096 1997 ntBASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDK11AQ9UQ88 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 CEND1P1-201ENST00000451006 455 ntBASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 AC004877.2-201ENST00000623941 599 ntBASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK11AQ9UQ88 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 AC002558.1-201ENST00000488906 803 ntBASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 POLD4-207ENST00000531239 584 ntTSL 2 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 AQP6-205ENST00000618286 829 ntTSL 5 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDK11AQ9UQ88 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC093677.2-201ENST00000600169 1863 ntBASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 SMN2-210ENST00000511812 867 ntTSL 2 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 KRT19P2-202ENST00000557173 1012 ntBASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 OR7E47P-204ENST00000575924 449 ntBASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AP002472.1-201ENST00000577490 586 ntBASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 PC-214ENST00000628663 1470 ntTSL 5 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK11AQ9UQ88 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDK11AQ9UQ88 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms