Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.89■■□□□ 1.25
PDZRN3Q9UPQ7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 AC096582.2-201ENST00000510860 516 ntBASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 POLD2P1-201ENST00000511220 997 ntBASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDZRN3Q9UPQ7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 AL163051.1-201ENST00000569214 1512 ntBASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.87■■□□□ 1.25
PDZRN3Q9UPQ7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 LTB4R2-202ENST00000528054 3092 ntBASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 SLC25A6P5-201ENST00000435663 894 ntBASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 AC113404.2-201ENST00000507884 177 ntBASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 LINC00896-202ENST00000609602 2128 ntBASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 FLJ13224-201ENST00000313737 1514 ntBASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDZRN3Q9UPQ7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 MIR7706-201ENST00000613747 67 ntBASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 FAM215A-202ENST00000632077 792 ntBASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDZRN3Q9UPQ7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms