Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 AC027307.3-201ENST00000594262 1100 ntBASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 AL132655.2-201ENST00000596276 594 ntBASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
COL17A1Q9UMD9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 CALY-202ENST00000368555 783 ntTSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 PIN1P1-201ENST00000412108 996 ntBASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 SPDYE11-202ENST00000450699 704 ntBASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 SPDYE9P-201ENST00000570642 692 ntBASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 SPDYE10P-202ENST00000612005 668 ntBASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 SPDYE8P-202ENST00000612377 668 ntBASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL17A1Q9UMD9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 IGHV3-42-201ENST00000520410 361 ntBASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
COL17A1Q9UMD9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
COL17A1Q9UMD9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL17A1Q9UMD9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
COL17A1Q9UMD9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL17A1Q9UMD9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL17A1Q9UMD9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 AC093484.2-201ENST00000580996 2166 ntBASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 AC019129.2-201ENST00000609837 1235 ntBASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.63■■□□□ 1.85
COL17A1Q9UMD9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 AC002056.1-201ENST00000395613 760 ntBASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 AL671277.1-201ENST00000429656 993 ntBASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL17A1Q9UMD9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 CU639417.3-201ENST00000624240 1404 ntBASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 AL499627.1-201ENST00000569373 2188 ntBASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms