Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCF1Q9UBD9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCF1Q9UBD9 MIR7706-201ENST00000613747 67 ntBASIC15.77■□□□□ 0.12
CLCF1Q9UBD9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCF1Q9UBD9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 BX640515.1-201ENST00000617215 977 ntBASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 FAM215A-202ENST00000632077 792 ntBASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 FLJ13224-201ENST00000313737 1514 ntBASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 PKD1P1-201ENST00000458669 6805 ntBASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 AC079776.2-201ENST00000641154 1609 ntBASIC15.76■□□□□ 0.11
CLCF1Q9UBD9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AP000997.3-201ENST00000623333 2250 ntBASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 HNRNPDP1-201ENST00000439535 754 ntBASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AC120114.3-201ENST00000611923 658 ntBASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AC073592.4-201ENST00000623827 446 ntBASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CLCF1Q9UBD9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms