Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN1Q9P244 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 AC004408.2-201ENST00000623613 2777 ntBASIC16.28■□□□□ 0.2
LRFN1Q9P244 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN1Q9P244 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRFN1Q9P244 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AC122714.2-201ENST00000502787 707 ntBASIC16.27■□□□□ 0.2
LRFN1Q9P244 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 SART3-203ENST00000546611 1184 ntBASIC16.27■□□□□ 0.2
LRFN1Q9P244 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 AL139288.1-201ENST00000623748 933 ntBASIC16.27■□□□□ 0.2
LRFN1Q9P244 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN1Q9P244 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN1Q9P244 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LRFN1Q9P244 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.27■□□□□ 0.19
LRFN1Q9P244 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
LRFN1Q9P244 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LRFN1Q9P244 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN1Q9P244 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 IL9RP2-201ENST00000423948 1312 ntBASIC16.26■□□□□ 0.19
LRFN1Q9P244 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms