Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 RNA5SP419-201ENST00000515908 135 ntBASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 AC148477.8-201ENST00000624298 468 ntBASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 KRT18P55-202ENST00000578578 1546 ntBASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.6■■□□□ 1.05
HMG20BQ9P0W2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 HLA-A-201ENST00000376802 1334 ntBASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMG20BQ9P0W2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 AC122714.2-201ENST00000502787 707 ntBASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 AP000867.4-201ENST00000641616 219 ntBASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.58■■□□□ 1.05
HMG20BQ9P0W2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.58■■□□□ 1.04
HMG20BQ9P0W2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMG20BQ9P0W2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HMG20BQ9P0W2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
HMG20BQ9P0W2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 COX5BP2-201ENST00000392354 334 ntBASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 AL662844.1-201ENST00000546340 181 ntBASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms