Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 AL135905.2-201ENST00000584934 1404 ntBASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC3Q9NUV7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 CA15P1-201ENST00000481698 905 ntBASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 REXO1L10P-201ENST00000615707 1290 ntBASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 REXO1L12P-201ENST00000622156 912 ntBASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.56■□□□□ 0.72
SPTLC3Q9NUV7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPTLC3Q9NUV7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 BCL2-203ENST00000589955 5011 ntBASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 KRT18P23-201ENST00000435622 1283 ntBASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 AC113410.3-201ENST00000623366 203 ntBASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC3Q9NUV7 AC100803.2-201ENST00000562459 1963 ntBASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 FAM201B-201ENST00000458407 597 ntBASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 ITM2C-210ENST00000620962 501 ntBASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC3Q9NUV7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 AC005915.1-201ENST00000624912 2018 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms