Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PP12613-201ENST00000424958 2230 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 DUTP2-201ENST00000519164 463 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 RN7SL850P-201ENST00000579959 291 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC140113.3-201ENST00000605663 199 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC112497.1-201ENST00000624824 639 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AL355312.1-201ENST00000407115 2176 ntBASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AC133963.1-201ENST00000504166 1679 ntBASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AC022898.2-201ENST00000616822 1312 ntBASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 KRT18P21-201ENST00000515767 1272 ntBASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.78□□□□□ -0.04
LIN7CQ9NUP9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
LIN7CQ9NUP9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 AC104390.1-201ENST00000555663 520 ntBASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms