Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 NUS1P1-201ENST00000446295 882 ntBASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 INTS4P1-201ENST00000438455 1935 ntBASIC21.61■■□□□ 1.05
ECHDC1Q9NTX5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 PCDHB18P-201ENST00000524813 2368 ntBASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 HLA-J-201ENST00000462773 1622 ntBASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC1Q9NTX5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AC138894.3-201ENST00000603787 634 ntBASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AC019129.2-201ENST00000609837 1235 ntBASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 SIRPAP1-201ENST00000448467 1770 ntBASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ECHDC1Q9NTX5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 FOSL1P1-201ENST00000511041 816 ntBASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC1Q9NTX5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms